BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009C01SP1|AL425996
(694 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1666 1266 0.0
>3x_Contig1666
Length = 16162
Score = 1266 bits (634), Expect = 0.0
Identities = 673/692 (97%), Gaps = 1/692 (0%)
Strand = Plus / Minus
Query: 1 tctggagmaagtaaagtaatcgcacagggttttgtcaacattactataagattgttgaac 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12415 tctggagcaagtaaagtaatcgcacagggttttgtcaacattactataagattgttgaac 12356
Query: 61 cgactacatctttacattatggaagagcaacgaaactcagtagacttagtaacttctgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12355 cgactacatctttacattatggaagagcaacgaaactcagtagacttagtaacttctgat 12296
Query: 121 gatgccagaaaatgggtagttgaagttatagavaatgtcggtgctttcaagagawagacc 180
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 12295 gatgccagaaaatgggtagttgaagttatagaaaatgtcggtgctttcaagagaaagacc 12236
Query: 181 aatagattttcgaacgtcttaacgaaggcgttccaaaactctgttctttataacatcaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12235 aatagattttcgaacgtcttaacgaaggcgttccaaaactctgttctttataacatcaag 12176
Query: 241 gatcacagcatgctgctggagagacttaggaatagtggacacttcttgatctacactgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12175 gatcacagcatgctgctggagagacttaggaatagtggacacttcttgatctacactgga 12116
Query: 301 gggatcctagaacaaaatgggatttatttaattgcaagtgaggagcttctaggatgctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12115 gggatcctagaacaaaatgggatttatttaattgcaagtgaggagcttctaggatgctct 12056
Query: 361 gatgatgaaataatggacattatcaaatctactaanatagggtccgntttgattccmaaa 420
||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||
Sbjct: 12055 gatgatgaaataatggacattatcaaatctactaaaatagggtccgatttgattccaaaa 11996
Query: 421 gttgngattaataatagtttaactatttacmaccctccagaggatcttacattacccgaa 480
|||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 11995 gttgaaattaataatagtttaactatttacaaccctccagaggatcttacattacccgaa 11936
Query: 481 gcgatgttcgtacagnaagaaagacgnaacggggtgtcctattatcattthvbacaagat 540
||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 11935 gcgatgttcgtacagaaagaaagacgaaacggggtgtcctattatcatttaaaacaagat 11876
Query: 541 gncctcacacagagagttggcattagaggtaaaggagg-agctcgacagcccctgaggaa 599
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 11875 gacctcacacagagagttggcattagaggtaaaggaggaagctcgacagcccctgaggaa 11816
Query: 600 gnaggagaagaactcgttcaactcgnaaacaaattgaaaatgcttggttatgttttggta 659
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 11815 gaaggagaagaactcgttcaactcgaaaacaaattgaaaatgcttggttatgttttggta 11756
Query: 660 ttctgtccaacaaaaccaatggtatgggatgg 691
||||||||||||||||||||||||||| ||||
Sbjct: 11755 ttctgtccaacaaaaccaatggtatggaatgg 11724
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3993
Number of Sequences: 1807
Number of extensions: 3993
Number of successful extensions: 78
Number of sequences better than 1.0e-20: 1
length of query: 694
length of database: 10,358,551
effective HSP length: 16
effective length of query: 678
effective length of database: 10,329,639
effective search space: 7003495242
effective search space used: 7003495242
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)